View source: R/enrich_path_graphics.R
PlotPathSummary | R Documentation |
x axis is the pathway impact factor y axis is the p value (from ORA or globaltest) return the circle information
PlotPathSummary(
mSetObj = NA,
show.grid,
imgName,
format = "png",
dpi = 72,
width = NA,
xlim = NA,
ylim = NA
)
mSetObj |
Input name of the created mSet Object |
show.grid |
logical, show grid or not |
imgName |
Input a name for the plot |
format |
Select the image format, "png", or "pdf". |
dpi |
Input the dpi. If the image format is "pdf", users need not define the dpi. For "png" images, the default dpi is 72. It is suggested that for high-resolution images, select a dpi of 300. |
width |
Input the width, there are 2 default widths, the first, width = NULL, is 10.5. |
xlim |
limit of x axis |
ylim |
limit of y axis |
Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
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