Read.TextData: Read.TextData Constructor to read uploaded CSV or TXT files...

In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data

Read.TextData Constructor to read uploaded CSV or TXT files into the dataSet object

Description

This function handles reading in CSV or TXT files and filling in the dataSet object created using "InitDataObjects".

Usage

Read.TextData(
  mSetObj = NA,
  filePath,
  format = "rowu",
  lbl.type = "disc",
  nmdr = FALSE
)

Arguments

mSetObj	Input the name of the created mSetObj (see InitDataObjects).
filePath	Input the path name for the CSV/TXT files to read.
format	Specify if samples are paired and in rows (rowp), unpaired and in rows (rowu), in columns and paired (colp), or in columns and unpaired (colu).
lbl.type	Specify the data label type, either categorical (disc) or continuous (cont).
nmdr	Boolean. Default set to FALSE (data is uploaded by the user and not fetched through an API call to the Metabolomics Workbench).

Author(s)

Jeff Xia [e-mail], Jasmine Chong McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR documentation built on Dec. 23, 2024, 3:44 p.m.