SAM.Anal: Perform Signifiance Analysis of Microarrays (SAM) analysis

In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data

Perform Signifiance Analysis of Microarrays (SAM) analysis

Description

Perform SAM

Usage

SAM.Anal(
  mSetObj = NA,
  method = "d.stat",
  paired = FALSE,
  varequal = TRUE,
  delta = 0,
  imgName,
  dpi = 72
)

Arguments

mSetObj	Input name of the created mSet Object
method	Method for SAM analysis, default is set to "d.stat", alternative is "wilc.stat"
paired	Logical, indicates if samples are paired or not. Default is set to FALSE
varequal	Logical, indicates if variance is equal. Default is set to TRUE
delta	numeric
imgName	image name, character
dpi	image dpi, integer

Author(s)

Jeff [e-mail] McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR documentation built on April 20, 2024, 8:13 p.m.