SanityCheckIndData: Sanity check of individual datasets for meta-analysis
In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data
View source: R/meta_data_utils.R
SanityCheckIndData R Documentation
Sanity check of individual datasets for meta-analysis
Description
Performs a sanity check on each-uploaded dataset for meta-analysis. Briefly, this function
will exclude empty rows, check class labels, ensure only 2 groups are being compared within the dataset,
ensure sample names are unique, remove low quality samples/features, and replace missing values.
Usage
SanityCheckIndData(mSetObj = NA, dataName)
Arguments
mSetObj
Input name of the created mSet Object
dataName
Input name of the dataset to perform the sanity check.
Author(s)
Jeff Xiajeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR documentation built on April 20, 2024, 8:13 p.m.
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View source: R/meta_data_utils.R
| SanityCheckIndData | R Documentation |
Sanity check of individual datasets for meta-analysis
Description
Performs a sanity check on each-uploaded dataset for meta-analysis. Briefly, this function will exclude empty rows, check class labels, ensure only 2 groups are being compared within the dataset, ensure sample names are unique, remove low quality samples/features, and replace missing values.
Usage
SanityCheckIndData(mSetObj = NA, dataName)
Arguments
mSetObj |
Input name of the created mSet Object |
dataName |
Input name of the dataset to perform the sanity check. |
Author(s)
Jeff Xiajeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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