iPCA.Anal: Perform PCA analysis, prepare file for interactive...
In xia-lab/MetaboAnalystR: An R Package for Comprehensive Analysis of Metabolomics Data
View source: R/multifac_pca_anova2.R
iPCA.Anal R Documentation
Perform PCA analysis, prepare file for interactive liveGraphics3D
Description
Perform PCA analysis, prepares a JSON file for interactive liveGraphics3D, as well as interactive 3D
PCA score and loading plots using the plotly R package. These plots are saved in the created mSetObj; to view these,
type "mSetObj$imgSet$time$score3d" to view the interactive score plot, and "mSetObj$imgSet$time$load3d" to view
the interactive loading plot.
Usage
iPCA.Anal(mSetObj, fileNm, metaCol, metaShape)
Arguments
mSetObj
Input the name of the created mSetObj (see InitDataObjects)
fileNm
select a file name
Author(s)
Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MetaboAnalystR documentation built on April 15, 2024, 12:16 p.m.
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View source: R/multifac_pca_anova2.R
| iPCA.Anal | R Documentation |
Perform PCA analysis, prepare file for interactive liveGraphics3D
Description
Perform PCA analysis, prepares a JSON file for interactive liveGraphics3D, as well as interactive 3D PCA score and loading plots using the plotly R package. These plots are saved in the created mSetObj; to view these, type "mSetObj$imgSet$time$score3d" to view the interactive score plot, and "mSetObj$imgSet$time$load3d" to view the interactive loading plot.
Usage
iPCA.Anal(mSetObj, fileNm, metaCol, metaShape)
Arguments
mSetObj |
Input the name of the created mSetObj (see InitDataObjects) |
fileNm |
select a file name |
Author(s)
Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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