CalculateImpVarCutoff: Calculate the Important Variable Cutoff
In xia-lab/MetaboAnalystR3.0: An R Package for Comprehensive Analysis of Metabolomics Data

This function calculates the all important features based on a specfic cutoff.

1	CalculateImpVarCutoff(mSetObj, spe.thresh, lev.thresh)

`mSetObj`	Input the name of the created mSetObj (see InitDataObjects)
`spe.thresh`	alpha threshold, less is better, default less than 5 percentile based chi-square note: spe and leverage are vectors, not a single value, but a list to store the result note: the last model is Model.res, no spe Calculate leverage cutoff based on permutation Calculate the reference distribution of leverages note: leverage.perm is a list with each member in a 3 column matrix
`lev.thresh`	leverage threshold, the higher better, default more than 95 percentile of permuted leverage

Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MetaboAnalystR3.0 documentation built on May 6, 2020, 11:03 p.m.

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