Description Usage Arguments Author(s)
View source: R/parameters_optimization.R
Peak picking Method
1 | calculatePPKs(object, object_mslevel, param, BPPARAM = bpparam(), msLevel = 1)
|
object |
MSnExp object, the trimmed or the original data. |
object_mslevel |
List, the parsed metabolomics scans produced by PeakPicking_prep. |
BPPARAM |
MulticoreParam method, used to set the parallel method. Default is bpparam(). |
msLevel |
Numeric, to specifiy the msLevel, only 1 permitted for now. 2 will be supported in the near future. |
xcmsSetParameters |
Matrix, the parameters combination produced automatically according to |
task |
Numeric, task order for XCMS paramters table to run the peak picking and alignment. |
Zhiqiang Pang zhiqiang.pang@mail.mcgill.ca Jeff Xia jeff.xia@mcgill.ca Mcgill University License: GNU GPL (>= 2)
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