heterochronous.gp.stat: Extraction of sampling and coalescent times from a...
In xiangfstats/GenieR: Inference of demographic history from phylogeny
Description
Usage
Arguments
Value
Author(s)
References
Examples
View source: R/heterochronous-gp-stat.R
Description
heterochronous.gp.stat extracts sampling and coalescent times from a phylogenetic tree.
Usage
1
Arguments
phy
A phylogenetic tree, which is an object of class "phylo".
Value
Alist of sampling times, coalescent times, total linages.
Author(s)
Fei Xiang (xf3087@gmail.com)
References
Palacios JA and Minin VN. Integrated nested Laplace approximation for Bayesian nonparametric phylodynamics, in Proceedings of the Twenty-Eighth Conference on Uncertainty in Artificial Intelligence, 2012.
Examples
1
2
3
library(ape)
t1=rcoal(20)
heterochronous.gp.stat(t1)
xiangfstats/GenieR documentation built on May 4, 2019, 1:06 p.m.
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Description Usage Arguments Value Author(s) References Examples
View source: R/heterochronous-gp-stat.R
Description
heterochronous.gp.stat extracts sampling and coalescent times from a phylogenetic tree.
Usage
1 |
Arguments
phy |
A phylogenetic tree, which is an object of class "phylo". |
Value
Alist of sampling times, coalescent times, total linages.
Author(s)
Fei Xiang (xf3087@gmail.com)
References
Palacios JA and Minin VN. Integrated nested Laplace approximation for Bayesian nonparametric phylodynamics, in Proceedings of the Twenty-Eighth Conference on Uncertainty in Artificial Intelligence, 2012.
Examples
1 2 3 | library(ape)
t1=rcoal(20)
heterochronous.gp.stat(t1)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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