Files in xiaolicbs/genotypeQC

.Rbuildignore.R

.gitignore

.travis.yml

DESCRIPTION

LICENSE

NAMESPACE

R/S3Method.R R/calZscore.R R/examples.R R/flagSamples.R R/getAttr.R R/hasAttr.R R/inferAncestry.R R/plot.R R/runExplorer.R R/sampleDataset.R R/setAttr.R R/utils.R README.md conduct.md contributing.md exec/sampleQcTool.R inst/apps/qcExplorer/global.R inst/apps/qcExplorer/server.R inst/apps/qcExplorer/ui.R man/PCplots.Rd man/calZscore.Rd man/calZscore.default.Rd man/calZscore.sampleDataset.Rd man/dim.sampleDataset.Rd man/dot-bamQcMetr.Rd man/dot-multiplotWithSharedLegend.Rd man/dot-scatter.Rd man/flagSamples.Rd man/flagSamples.default.Rd man/flagSamples.sampleDataset.Rd man/getAttr.Rd man/getAttr.sampleDataset.Rd man/hasAttr.Rd man/inferAncestry.Rd man/inferAncestry.default.Rd man/inferAncestry.sampleDataset.Rd man/sampleDataset.Rd man/sampleQcPlot.Rd man/sampleQcPlot.default.Rd man/sampleQcPlot.sampleDataset.Rd man/save.Rd man/save.sampleDataset.Rd man/setAttr.Rd man/setAttr.sampleDataset.Rd man/sort.sampleDataset.Rd

samplyzer.Rproj

tests/testthat.R

tests/testthat/data/bamQc.tsv

tests/testthat/helper-sds.R tests/testthat/testFlagSamples.R tests/testthat/testGetAttr.R tests/testthat/testPlot.R tests/testthat/testSampleDataset.R tests/testthat/testSetAttr.R tests/testthat/testUtils.R

vignettes/data/bamQcMetr.tsv

vignettes/data/refPCs.tsv

vignettes/data/sampleAnnotations.tsv

vignettes/data/samplePCs.tsv

vignettes/data/vcfQcMetr.tsv

vignettes/run.sh

vignettes/tutorial.Rmd

xiaolicbs/genotypeQC documentation built on Sept. 2, 2023, 9:31 p.m.