divModule: Dividing Modules.

In xiaolw95/NetMoss: Identify Differential Bacteria from Network

Dividing Modules.

Description

This is a function to divide integrated networks into different modules.

Usage

divModule(case_union, control_union, deepSplit = 4, minModuleSize = 20)

Arguments

case_union	a matrix of integrated diseased network.
control_union	a matrix of integrated healthy network.
deepSplit	For method "hybrid", can be either logical or integer in the range 0 to 4. For method "tree", must be logical. In both cases, provides a rough control over sensitivity to cluster splitting. The higher the value (or if TRUE), the more and smaller clusters will be produced. For the "hybrid" method, a finer control can be achieved via maxCoreScatter and minGap below.
minModuleSize	Minimum module size.

Value

divided modules.

Examples

Data(TestData)
divModule(TestData[[1]], TestData[[2]])

xiaolw95/NetMoss documentation built on May 8, 2022, 11:03 p.m.