netROC: Plot the combined ROC

In xiaolw95/NetMoss: Identify Differential Bacteria from Network

Plot the combined ROC

Description

This is a function to plot ROC of combined study.

Usage

netROC(case_dir, control_dir, marker, metadata, plot.roc = T, train.num = 20)

Arguments

case_dir	string.The directory of diseased data set.
control_dir	string.The directory of healthy data set.
marker	the combined markers identified by NetMoss.
metadata	the metadata of all input studies.
plot.roc	logical.If TURE then the combined ROC will be plotted.
train.num	numerical. training times for the module. 20 was set by default.

Value

a TPR and FPR table of the combined study.

Examples

myROC = netROC(case_dir = case_dir,
     control_dir = control_dir,
     marker = marker,
     metadata = metadata,
     plot.roc = T,
     train.num = 20)

xiaolw95/NetMoss documentation built on May 8, 2022, 11:03 p.m.