DeltaDcorplot: Plot correlation matrix for pairwise Delta D

In xinghuq/HierDpart: Partitioning Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems

Plot correlation matrix for pairwise Delta D

Description

This function plots the pairwise genetic differentiation (Delta D).

Usage

DeltaDcorplot(x, ncode)

Arguments

x	The genetic data file, genepop format.
ncode	The coding type of the genetic data.

Details

This function returns the pairwise genetic differentiation (Delta D) plot.

Value

The result will return a genetic differentiation (Delta D) correlation plot.

Author(s)

[e-mail]

References

Qin, X., & Gaggiotti, O. E. (2022). Information-based summary statistics for spatial genetic structure inference. Molecular Ecology Resources, 22(6), 2183-2195.

Gaggiotti, O. E., Chao, A., Peres-Neto, P., Chiu, C. H., Edwards, C., Fortin, M. J., ... & Selkoe, K. A. (2018). Diversity from genes to ecosystems: A unifying framework to study variation across biological metrics and scales. Evolutionary Applications.

See Also

HierD; CorDdplot

Examples

# example genepop file
f1 <- function(f) system.file("extdata", f,package="HierDpart")
DeltaDcorplot(f1("Island.gen"),ncode=3)

xinghuq/HierDpart documentation built on March 21, 2023, 6:43 p.m.