DetaDcorplot: Plot correlation matrix for pairwise deta D.

In xinghuq/HierDpart: Partitioning Diversity and Differentiation Across Metrics and Scales, from Genes to Ecosystems

Plot correlation matrix for pairwise deta D.

Description

This function plots the pairwise genetic differentiation (deta D).

Usage

DetaDcorplot(x, ncode)

Arguments

x	The genetic data file, specifically genepop format.
ncode	The coding type of the genetic data.

Details

This function returns the pairwise genetic differentiation (deta D) plot.

Value

The result will return a genetic differentiation (deta D) correlation plot.

Author(s)

[e-mail]

References

Gaggiotti, O. E., Chao, A., Peres-Neto, P., Chiu, C. H., Edwards, C., Fortin, M. J., ... & Selkoe, K. A. (2018). Diversity from genes to ecosystems: A unifying framework to study variation across biological metrics and scales. Evolutionary Applications.

See Also

HierD; CorDdplot

Examples

infile <- system.file('extdata', 'Island.gen',package='HierDpart')
locinfile <- 'Island.gen' ## file in user's directory not in R's extdata directory
check <- file.copy(infile,locinfile,overwrite=TRUE)
DetaDcorplot(infile,ncode=3)

xinghuq/HierDpart documentation built on March 21, 2023, 6:43 p.m.