API for xryanglab/xtail
Genome-wide assessment of differential translations with ribosome profiling data

Global functions
boundFC Source code
buildDataFrameWithNARows Source code
buildMatrixWithNARows Source code
dispersionMatrix.DESeqDataSet Source code
estimateFun Source code
estimateMLEForBeta Source code
estimateSizeFactorsForMatrix Source code
factorPresentThreeOrMoreLevels Source code
fitBeta2 Source code
fitBetaWrapper Source code
fitNbinomGLMs Source code
fitNbinomGLMsOptim Source code
getBaseMeansAndVariances Source code
getDesignFactors Source code
matrixToList Source code
nbinomLogLike Source code
plotFCs Man page Source code
plotRs Man page Source code
probDensity Source code
probMatrix Source code
probMatrixCI Source code
renameModelMatrixColumns Source code
resultsTable Man page
resultsTable.xtailResults Source code
sanitizeRowData Source code
summary Man page
summary.xtailResults Source code
testdata Man page
volcanoPlot Man page Source code
write.xtail Man page Source code
xTest Source code
xTestWrapper Source code
xtail Man page Source code
xtailDispersionFit Source code
xtail_test Source code
xryanglab/xtail documentation built on May 28, 2017, 8:32 a.m.