glm_MI_CR: Apply Copy-Reference(CR) Method to Update JAGS MCMC outputs...

In xsswang/remiod: Reference-Based Multiple Imputation for Ordinal/Binary Response

Apply Copy-Reference(CR) Method to Update JAGS MCMC outputs under MAR for Generalized Linear Model

Description

Internal function to obtain Copy-Reference(CR) MCMC from an MAR object.

Usage

glm_MI_CR(object, treatment, start = NULL, end = NULL, thin = NULL,
  exclude_chains = NULL, subset = FALSE, seed = 5432, mess = FALSE,
  ...)

Arguments

object	an object of class remiod
treatment	the variable name of treatment. Reference level of treatment should be coded as 0.
start	first iteration to be used
end	last iteration to be used
thin	thinning to be applied
exclude_chains	optional vector of numbers, indexing MCMC chains to be excluded from the output
subset	subset of parameters (columns of the mcmc object) to be used
seed	optional seed value.
mess	logical, should messages be displayed?
...	optional arguments pass from main function.

Value

A matrix of MCMC samples with all monitored parameters.A subset of the MCMC sample can be selected using start, end and thin.

xsswang/remiod documentation built on Feb. 20, 2023, 9:29 a.m.