Man pages for yangjl/imputeR
Imputation of GBS genotypes via window phasing
| create_array | 'Create GBS.array objects' |
| doc_example | Sum of vector elements. |
| error_probs | Return error matrices |
| estimate_error | 'Estimate genotyping error' |
| GBS.array-class | A S4 class stores genomic data. |
| get_phased | 'Method for GBS.array' |
| getsfs | setup the neutral SFS |
| get_true_GBS | 'Method for GBS.array' |
| hw_probs | Return HW probs |
| impute_kid | 'Phasing and Imputing Kid Genotypes' |
| impute_parent | 'Impute Parent Genotype' |
| imputeRob | 'Create imputeR object. ' |
| join_chunks | 'Joining phased haplotype chunks. ' |
| mendelian_check | 'Create GBS.array objects' |
| phase_chunk | 'Phasing haplotype chunks. ' |
| phase_parent | 'Phasing haplotypes of focal parent' |
| sim.array | 'A progeny array simulator.' |
| update_gbs_parents | 'Update GBS.array object' |
