R/utils.R

In yangjl/maizeR: Generate pipelines for maize Genomic and Genetic analysis

makeTransparent = function(..., alpha=0.5) {

  if(alpha<0 | alpha>1) stop("alpha must be between 0 and 1")

  alpha = floor(255*alpha)
  newColor = col2rgb(col=unlist(list(...)), alpha=FALSE)

  .makeTransparent = function(col, alpha) {
    rgb(red=col[1], green=col[2], blue=col[3], alpha=alpha, maxColorValue=255)
  }

  newColor = apply(newColor, 2, .makeTransparent, alpha=alpha)
  return(newColor)
}