ygu427/HDSSM: High-dimensional linear SSM for dynamic GRN
Version 1.1

A high-dimensional linear State Space Model(SSM) with a new Expectation-Regularization-Maximization(ERM) algorithm to construct the dynamic Gene Regularization Network(GRN). The new ERM algorithm employs the idea of the adaptive LASSO-based variable selection method to preserve the sparsity property of GRN.

Getting started

Package details

AuthorYu Gu supervised by Xing Qiu
MaintainerYu Gu <[email protected]>
LicenseGPL-2
Version1.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("ygu427/HDSSM")
ygu427/HDSSM documentation built on May 28, 2017, 9:35 a.m.