getmmnet: Generate metabolites-metabolites network

In yufree/enet: Network Analysis for Exposomics

Generate metabolites-metabolites network

Description

Generate metabolites-metabolites network

Usage

getmmnet(meta, cutoff = 0.9, m = NULL, name = NULL, ...)

Arguments

meta	metabolites dataframe with row as metabolites/peaks and column as samples
cutoff	correlation coefficient cutoff
m	value or vector, specific metabolite or peak to its export network
name	export gml file for Cytoscape
...	other parameters for 'cor'

Value

list with index of metabolites clusters, metabolites clusters data and edge table

Examples

data(meta)
mm <- getmmnet(meta)

yufree/enet documentation built on March 20, 2022, 11:59 p.m.