getupload3: Get the csv files to be submitted to Metaboanalyst

In yufree/enviGCMS: GC/LC-MS Data Analysis for Environmental Science

Get the csv files to be submitted to Metaboanalyst

Description

Get the csv files to be submitted to Metaboanalyst

Usage

getupload3(list, name = "Peaklist")

Arguments

list	list with data as peaks list, mz, rt and group information
name	file name

Value

dataframe with data needed for Metaboanalyst if your want to perform local analysis.

See Also

getmzrt, getmzrt2

Examples

## Not run: 
library(faahKO)
cdfpath <- system.file('cdf', package = 'faahKO')
xset <- getdata2(cdfpath,
ppp = xcms::MatchedFilterParam(),
rtp = xcms::ObiwarpParam(),
gpp = xcms::PeakDensityParam())
xset <- enviGCMS::getmzrt2(xset)
getupload3(xset)

## End(Not run)

yufree/enviGCMS documentation built on Sept. 12, 2023, 6:34 p.m.