svadata | R Documentation |
Filter the data with p value and q value
svadata(list, pqvalues = "sv", pt = 0.05, qt = 0.05)
list |
results from svacor function |
pqvalues |
method for ANOVA or SVA |
pt |
threshold for p value, default is 0.05 |
qt |
threshold for q value, default is 0.05 |
data, corrected data, mz and retention for filerted data
## Not run:
library(faahKO)
cdfpath <- system.file("cdf", package = "faahKO")
cdffiles <- list.files(cdfpath, recursive = TRUE, full.names = TRUE)
xset <- xcmsSet(cdffiles)
xset <- group(xset)
xset2 <- retcor(xset, family = "symmetric", plottype = "mdevden")
xset2 <- group(xset2, bw = 10)
xset3 <- fillPeaks(xset2)
df <- svacor(xset3)
svadata(df)
## End(Not run)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.