yuhuihui2011/vasp: Quantification and Visualization of Variations of Splicing in Population

Discovery of genome-wide variable alternative splicing events from short-read RNA-seq data and visualizations of gene splicing information for publication-quality multi-panel figures in a population. (Warning: The visualizing function is removed due to the dependent package Sushi deprecated. If you want to use it, please change back to an older version.)

Getting started

Package details

Bioconductor views AlternativeSplicing Clustering DifferentialExpression DifferentialSplicing ImmunoOncology KEGG Preprocessing RNASeq StatisticalMethod Visualization
LicenseGPL (>= 2.0)
URL https://github.com/yuhuihui2011/VaSP
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
yuhuihui2011/vasp documentation built on Jan. 12, 2022, 7:50 a.m.