dot-count_matrix: Generate Count Matrix.

In zentnerlab/TSRexploreR: TSS and TSR Analysis

Generate Count Matrix.

Description

Generate Count Matrix.

Usage

.count_matrix(
  count_data,
  data_type = c("tss", "tsr"),
  use_normalized = FALSE,
  threshold = NULL
)

Arguments

count_data	Named list of counts.
data_type	Whether to get matrix of TSS ('tss') or TSR ('tsr') counts.
use_normalized	Whether to use the normalized (TRUE) or raw (FALSE) counts.
threshold	TSSs or TSRs with a score below this value will not be considered.

zentnerlab/TSRexploreR documentation built on Dec. 30, 2022, 10:27 p.m.