get_assembly: Get Genome Assembly
In zentnerlab/TSRexploreR: TSS and TSR Analysis
get_assembly R Documentation
Get Genome Assembly
Description
Extract the genome assembly.
Usage
get_assembly(experiment)
Arguments
experiment
TSRexploreR object.
Value
Either BSgenome or FaFile depending on original source of assembly.
See Also
get_annotation to get genome annotation.
Examples
assembly <- system.file("extdata", "S288C_Assembly.fasta", package="TSRexploreR")
exp <- tsr_explorer(genome_assembly=assembly)
a <- get_assembly(exp)
zentnerlab/TSRexploreR documentation built on Dec. 30, 2022, 10:27 p.m.
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| get_assembly | R Documentation |
Get Genome Assembly
Description
Extract the genome assembly.
Usage
get_assembly(experiment)
Arguments
experiment |
TSRexploreR object. |
Value
Either BSgenome or FaFile depending on original source of assembly.
See Also
get_annotation to get genome annotation.
Examples
assembly <- system.file("extdata", "S288C_Assembly.fasta", package="TSRexploreR")
exp <- tsr_explorer(genome_assembly=assembly)
a <- get_assembly(exp)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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