Files in zhangjunpeng411/miRspongeR
Identification and analysis of miRNA sponge regulation
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/miRspongeR.R
README.md
inst/CITATION
inst/extdata/ExpData.csv
inst/extdata/Groundtruth.csv
inst/extdata/MREs.csv
inst/extdata/SurvData.csv
inst/extdata/miR2Target.csv
inst/extdata/precomputed_null_model.rda
man/integrateMethod.Rd
man/moduleDEA.Rd
man/moduleFEA.Rd
man/moduleSurvival.Rd
man/netModule.Rd
man/precomputed_null_model.Rd
man/querymiRTargetbinding.Rd
man/sample_cor_network.Rd
man/spongeMethod.Rd
man/spongeValidate.Rd
man/sponge_sample_specific.Rd
miRspongeR.Rproj
src/Makevars
src/Makevars.win
src/OCG_algorithm.c
src/OCG_algorithm.o
src/complex.c
src/complex.o
src/edge_duplicates.cpp
src/edge_duplicates.o
src/linkcomm_edgesims.cpp
src/linkcomm_edgesims.o
src/linkcomm_edgesims_all.cpp
src/linkcomm_edgesims_all.o
src/linkcomm_functions.cpp
src/linkcomm_functions.o
src/linkcomm_hclust.cpp
src/linkcomm_hclust.o
src/linkcomm_init.c
src/linkcomm_init.o
src/linkcomm_linkdensities.cpp
src/linkcomm_linkdensities.o
src/linkcommhclust_order.cpp
src/linkcommhclust_order.o
src/miRspongeR.dll
src/read_OCG.cpp
src/read_OCG.o
src/registerDynamicSymbol.c
src/registerDynamicSymbol.o
tests/test_miRspongeR.R
vignettes/miRspongeR.Rmd
