ms2Score.old: Title Give MSMS Score.
In zhengfj1994/MeTEA: Targeted extraction from untargeted metabolomics dataset by using metabolomics database
Description
Usage
Arguments
Value
Examples
Description
Title
Give MSMS Score.
Usage
1
ms2Score.old(ms2Act, ms2DB, ms2DeltaMZ, sn.threshold = 3, scoreMode)
Arguments
ms2Act,
measured ms2
ms2DB,
ms2 in database
ms2DeltaMZ,
the tolerence between ms2Act and ms2DB
sn.threshold
The S/N threshold of MS2 spectrum.
scoreMode,
the mode of score, obverse, reverse or average
Value
scoreOfMS2
Examples
1
2
3
4
5
6
7
load(system.file("extdata/testData", "ms2ActTest.rda", package = "MetEx"))
load(system.file("extdata/testData", "ms2DBTest.rda", package = "MetEx"))
scoreOfMS2 <- ms2Score.old(ms2Act = ms2ActTest,
ms2DB = ms2DBTest,
ms2DeltaMZ=0.02,
sn.threshold = 3,
scoreMode='average')
zhengfj1994/MeTEA documentation built on June 29, 2021, 5:21 a.m.
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Description Usage Arguments Value Examples
Description
Title Give MSMS Score.
Usage
1 | ms2Score.old(ms2Act, ms2DB, ms2DeltaMZ, sn.threshold = 3, scoreMode)
|
Arguments
ms2Act, |
measured ms2 |
ms2DB, |
ms2 in database |
ms2DeltaMZ, |
the tolerence between ms2Act and ms2DB |
sn.threshold |
The S/N threshold of MS2 spectrum. |
scoreMode, |
the mode of score, obverse, reverse or average |
Value
scoreOfMS2
Examples
1 2 3 4 5 6 7 | load(system.file("extdata/testData", "ms2ActTest.rda", package = "MetEx"))
load(system.file("extdata/testData", "ms2DBTest.rda", package = "MetEx"))
scoreOfMS2 <- ms2Score.old(ms2Act = ms2ActTest,
ms2DB = ms2DBTest,
ms2DeltaMZ=0.02,
sn.threshold = 3,
scoreMode='average')
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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