Man pages for zhuchcn/HTSet
High through-put experiment dataset container
| barplot | barplot for fet enrichment test |
| dimensions | Get dimemsions |
| ecdf | ecdf plot for kst enrichment test |
| enrichment_test | Enrichment test |
| exrna | exRNA from human isolated HDL |
| featureNames-HTSet-method | Get or set the feature names of an HTSet object |
| format_lipid_name | format lipid names |
| hist.ModelFit | p value histogram |
| HTSet | HTSet S4 class constructur |
| HTSet-class | HTSet |
| HTSet-Extract | Extract or replace parts of an HTSet object |
| lipidome | lipidomics dataset from human isolated HDL |
| model_fit | statistic tests for HTSet |
| mz2molwt | m/z to molecular weight |
| nCarbons | Extract the carbon chain length |
| nDoubleBonds | number of double bonds |
| nFattyAcyls | number of fatty acyls |
| plot_boxplot | make a boxplot |
| sampleNames-HTSet-method | Get or set the sample names of an HTSet object |
| subset_features | Subset features |
| subset_samples | Subset samples |
| summarize_ACL | summarize average carbon chain length |
| summarize_EOD | Equivalent Double Bond per 18 carbons |
| summarize_feature | Summarize by feature variable |
| summarize_lipid_ratios | Calculate lipid classes ratios |
| summarize_odd_chain | summarize odd chain lipids |
| transform_by_feature | Transform by feature |
| transform_by_sample | Transform by sample |
| validateArgsInOptions | validate args in options |
| volcanoplot.ModelFit | volcano plot |
| wcmc_adduct | show wcmc's adduct table |
