Description Usage Arguments Details See Also
Assignment methods for the SummarizedPhyloseq-class
class and the SummarizedPhyloStats-class
class
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 | ## S4 replacement method for signature 'SummarizedPhyloseq'
kingdom_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
phylum_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
class_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
order_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
family_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
genus_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloseq'
species_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
kingdom_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
phylum_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
class_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
order_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
family_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
genus_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats'
species_table(object) <- value
## S4 replacement method for signature 'SummarizedPhyloStats,ANY'
otu_table(x) <- value
|
object |
(Required) |
value |
(Required) |
These methods assign an new otu_table-class
object to either a SummarizedPhyloseq or a SummarizedPhyloStats object.
SummarizedPhyloseq-class
SummarizedPhyloStats-class
summarizeFromPhyloseq
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