covars: Make covariate table for Model 1

In zjiang2/haitipkg: R Package for Haiti Article

Make covariate table for Model 1

Description

Generate a data frame containing weekly values for periodic basis splines for the seasonal transmission term beta.

Usage

covars(
  tmin,
  tmax,
  byt = 1,
  nbasis = 6,
  degree = 6,
  per = 52.14,
  data,
  settings
)

Arguments

tmin	first observation time
tmax	last observation time
byt	number of steps between each time
nbasis	number of basis spline terms
degree	degrees of freedom for the basis splines
per	period of the basis spline
data	haiti cholera observations
settings	settings for the vaccination campaign scenario

zjiang2/haitipkg documentation built on March 1, 2024, 11:34 p.m.