CellTrails
Reconstruction, visualization and analysis of branching trajectories

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states: GET states

states: GET states
In CellTrails: Reconstruction, visualization and analysis of branching trajectories

Description Usage Arguments Details Value Author(s) See Also Examples

Description

Retrieve computed states from a SingleCellExperiment object

Usage

1
states(object)

Arguments

object

An object of class SingleCellExperiment

Details

State information is extracted from colData; factor levels are alphanumerically ordered by ID.

Value

A factor vector

Author(s)

Daniel C. Ellwanger

See Also

SingleCellExperiment findStates

Examples

1
2
3
4
# Example data
data(exSCE)

states(exSCE)[seq_len(5)]

CellTrails documentation built on Nov. 8, 2020, 5:53 p.m.

Related to states in CellTrails...

CellTrails index
README.md CellTrails: Reconstruction, visualization, and analysis of branching trajectories from single-cell expression data CellTrails: Reconstruction, visualization, and analysis of branching trajectories from single-cell expression data

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