Description Details Author(s) See Also
The GenomicRangesList virtual class is a general container for storing a list of GenomicRanges objects.
Most users are probably more interested in the GRangesList container, a GenomicRangesList derivative for storing a list of GRanges objects.
The place of GenomicRangesList in the Vector class hierarchy:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 | Vector
^
|
List
^
|
RangesList
^ ^
/ \
/ \
/ \
/ \
/ \
/ \
IntegerRangesList GenomicRangesList
^ ^
| |
IRangesList GRangesList
^ ^ ^ ^
/ \ / \
/ \ / \
/ \ / \
SimpleIRangesList \ SimpleGRangesList \
CompressedIRangesList CompressedGRangesList
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Note that the Vector class hierarchy has many more classes. In particular Vector, List, IRangesList, and IntegerRangesList have other subclasses not shown here.
H. Pag<c3><a8>s and M. Lawrence
GRangesList objects.
GenomicRanges and GRanges objects.
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