ggridges: Formula interface to ggridges plots

In ggformula: Formula Interface to the Grammar of Graphics

Formula interface to ggridges plots

Description

Formula interface to ggridges plots

Usage

gf_ridgeline(
  object = NULL,
  gformula = NULL,
  data = NULL,
  ...,
  height,
  scale = 1,
  min_height = 0,
  color,
  fill,
  alpha,
  group,
  linetype,
  linewidth,
  point_size,
  point_shape,
  point_colour,
  point_fill,
  point_alpha,
  point_stroke,
  xlab,
  ylab,
  title,
  subtitle,
  caption,
  geom = "ridgeline",
  stat = "identity",
  position = "identity",
  show.legend = NA,
  show.help = NULL,
  inherit = TRUE,
  environment = parent.frame()
)

gf_density_ridges(
  object = NULL,
  gformula = NULL,
  data = NULL,
  ...,
  height,
  scale = 1,
  rel_min_height = 0,
  color,
  fill,
  alpha,
  group,
  linetype,
  linewidth,
  point_size,
  point_shape,
  point_colour,
  point_fill,
  point_alpha,
  point_stroke,
  panel_scaling = TRUE,
  xlab,
  ylab,
  title,
  subtitle,
  caption,
  geom = "density_ridges",
  stat = "density_ridges",
  position = "points_sina",
  show.legend = NA,
  show.help = NULL,
  inherit = TRUE,
  environment = parent.frame()
)

gf_density_ridges2(
  object = NULL,
  gformula = NULL,
  data = NULL,
  ...,
  height,
  scale = 1,
  rel_min_height = 0,
  color,
  fill,
  alpha,
  group,
  linetype,
  linewidth,
  point_size,
  point_shape,
  point_colour,
  point_fill,
  point_alpha,
  point_stroke,
  panel_scaling = TRUE,
  xlab,
  ylab,
  title,
  subtitle,
  caption,
  geom = "density_ridges2",
  stat = "density_ridges",
  position = "points_sina",
  show.legend = NA,
  show.help = NULL,
  inherit = TRUE,
  environment = parent.frame()
)

gf_density_ridgeline_gradient(
  object = NULL,
  gformula = NULL,
  data = NULL,
  ...,
  height,
  color,
  fill,
  alpha,
  group,
  linetype,
  linewidth,
  gradient_lwd = 0.5,
  xlab,
  ylab,
  title,
  subtitle,
  caption,
  geom = "ridgeline_gradient",
  stat = "identity",
  position = "identity",
  show.legend = NA,
  show.help = NULL,
  inherit = TRUE,
  environment = parent.frame()
)

gf_density_ridges_gradient(
  object = NULL,
  gformula = NULL,
  data = NULL,
  ...,
  height,
  panel_scaling = TRUE,
  color,
  fill = ~stat(x),
  alpha,
  group,
  linetype,
  linewidth,
  gradient_lwd = 0.5,
  xlab,
  ylab,
  title,
  subtitle,
  caption,
  geom = "density_ridges_gradient",
  stat = "density_ridges",
  position = "points_sina",
  show.legend = NA,
  show.help = NULL,
  inherit = TRUE,
  environment = parent.frame()
)

Arguments

object	When chaining, this holds an object produced in the earlier portions of the chain. Most users can safely ignore this argument. See details and examples.
gformula	A formula with shape ~ x. Faceting can be achieved by including | in the formula.
data	The data to be displayed in this layer. There are three options: If NULL, the default, the data is inherited from the plot data as specified in the call to ggplot(). A data.frame, or other object, will override the plot data. All objects will be fortified to produce a data frame. See fortify() for which variables will be created. A function will be called with a single argument, the plot data. The return value must be a data.frame, and will be used as the layer data. A function can be created from a formula (e.g. ~ head(.x, 10)).
...	Additional arguments. Typically these are (a) ggplot2 aesthetics to be set with attribute = value, (b) ggplot2 aesthetics to be mapped with attribute = ~ expression, or (c) attributes of the layer as a whole, which are set with attribute = value.
height	The height of each ridgeline at the respective x value. Automatically calculated and provided by ggridges::stat_density_ridges() if the default stat is not changed.
scale	A scaling factor to scale the height of the ridgelines relative to the spacing between them. A value of 1 indicates that the maximum point of any ridgeline touches the baseline right above, assuming even spacing between baselines.
min_height	A height cutoff on the drawn ridgelines. All values that fall below this cutoff will be removed. The main purpose of this cutoff is to remove long tails right at the baseline level, but other uses are possible. The cutoff is applied before any height scaling is applied via the scale aesthetic. Default is 0, so negative values are removed.
color	A color or a formula used for mapping color.
fill	A color for filling, or a formula used for mapping fill.
alpha	Opacity (0 = invisible, 1 = opaque).
group	Used for grouping.
linetype	A linetype (numeric or "dashed", "dotted", etc.) or a formula used for mapping linetype.
linewidth	A numerical line width or a formula used for mapping linewidth.
point_shape, point_colour, point_size, point_fill, point_alpha, point_stroke	As in ggridges::geom_ridgeline().
xlab	Label for x-axis. See also gf_labs().
ylab	Label for y-axis. See also gf_labs().
title, subtitle, caption	Title, sub-title, and caption for the plot. See also gf_labs().
geom, stat	Use to override the default connection between geom_density() and stat_density().
position	Position adjustment, either as a string naming the adjustment (e.g. "jitter" to use position_jitter), or the result of a call to a position adjustment function. Use the latter if you need to change the settings of the adjustment.
show.legend	logical. Should this layer be included in the legends? NA, the default, includes if any aesthetics are mapped. FALSE never includes, and TRUE always includes. It can also be a named logical vector to finely select the aesthetics to display.
show.help	If TRUE, display some minimal help.
inherit	A logical indicating whether default attributes are inherited.
environment	An environment in which to look for variables not found in data.
rel_min_height	Lines with heights below this cutoff will be removed. The cutoff is measured relative to the overall maximum, so rel_min_height = 0.01 would remove everything. Default is 0, so nothing is removed.
panel_scaling	If TRUE, the default, relative scaling is calculated separately for each panel. If FALSE, relative scaling is calculated globally.
gradient_lwd	A parameter to needed to remove rendering artifacts inside the rendered gradients. Should ideally be 0, but often needs to be around 0.5 or higher.

Details

Note that the ggridges::stat_density_ridges() makes joint density estimation across all datasets. This may not generate the desired result when using faceted plots. As an alternative, you can set stat = "density" to use ggplot2::stat_density(). In this case, it is required to add the aesthetic mapping height = after_stat(density) (see examples).

See Also

ggridges::geom_density_ridges()

ggridges::geom_ridgeline()

ggridges::geom_density_ridges_gradient()

Examples

data.frame(
  x = rep(1:5, 3), y = c(rep(0, 5), rep(1, 5), rep(3, 5)),
  height = c(0, 1, 3, 4, 0, 1, 2, 3, 5, 4, 0, 5, 4, 4, 1)
) |>
  gf_ridgeline(y ~ x, height = ~ height, group = ~y, fill = "lightblue", alpha = 0.7)
diamonds |>
  gf_density_ridges(cut ~ price,
    scale = 2, fill = ~ cut, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )
diamonds |>
  gf_density_ridges(clarity ~ price | cut,
    scale = 2, fill = ~ clarity, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )
## Not run: 
diamonds |>
  gf_density_ridges(clarity ~ price | cut, height = ~after_stat(density), stat = "density",
    scale = 2, fill = ~ clarity, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )

## End(Not run)
## Not run: 
diamonds |>
  gf_density_ridges2(cut ~ price, scale = 2, fill = ~ cut, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )

## End(Not run)
diamonds |>
  gf_density_ridges(cut ~ price,
    scale = 2, fill = ~ cut, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )
diamonds |>
  gf_density_ridges(clarity ~ price | cut,
    scale = 2, fill = ~ clarity, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )
## Not run: 
diamonds |>
  gf_density_ridges(clarity ~ price | cut, height = ~ after_stat(density), stat = "density",
    scale = 2, fill = ~ clarity, alpha = 0.6, show.legend = FALSE) |>
  gf_theme(theme_ridges()) |>
  gf_refine(
    scale_y_discrete(expand = c(0.01, 0)),
    scale_x_continuous(expand = c(0.01, 0))
  )

## End(Not run)
## Not run: 
mosaicData::Weather |>
  gf_density_ridges_gradient(month ~ high_temp | city ~ ., fill = ~stat(x),
    group = ~ month, show.legend = FALSE, rel_min_height = 0.02) |>
  gf_refine(scale_fill_viridis_c(option = "B"), theme_bw())

## End(Not run)

ggformula documentation built on Nov. 9, 2023, 5:08 p.m.