imd_schema: Get Immundata internal schema field names

In immundata: A Unified Data Layer for Large-Scale Single-Cell, Spatial and Bulk Immunomics

Get Immundata internal schema field names

Description

Returns the standardized field names used across Immundata objects and processing functions, as defined in IMD_GLOBALS$schema. These include column names for cell ids or barcodes, receptors, repertoires, and related metadata.

Usage

imd_schema(key = NULL)

imd_schema_sym(key = NULL)

imd_meta_schema()

imd_files()

imd_rename_cols(format = "default")

imd_drop_cols(format = "airr")

imd_repertoire_schema(format = "airr")

imd_receptor_features(schema)

imd_receptor_chains(schema)

Arguments

key	Character which field to return.
format	Character what format to load - "airr" or "10x".
schema	Receptor schema from make_receptor_schema().

immundata documentation built on April 4, 2026, 9:09 a.m.