ASSET: An R package for subset-based association analysis of heterogeneous traits and subtypes
Version 1.1.2

An R package for subset-based analysis of heterogeneous traits and subtypes

Browse man pages Browse package API and functions Browse package files

AuthorSamsiddhi Bhattacharjee, Nilanjan Chatterjee and William Wheeler
Date of publication2013-05-02 12:50:59
MaintainerWilliam Wheeler <WheelerB@imsweb.com>
LicenseGPL-2 + file LICENSE
Version1.1.2
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ASSET", repos="http://R-Forge.R-project.org")

Man pages

ASSET: Association analysis for SubSETs
data: Data for the h.traits example
h.forestPlot: Forest plot for meta-analysis of heterogenerous traits or...
h.summary: summary results from subset-search.
h.traits: Heterogeneous traits or studies
h.types: Heterogeneous Subtype analysis
p.dlm: Discrete Local Maxima approximate p-value.
p.dlm.ls: Discrete Local Maxima approximate p-value.
p.tube: Importance sampling-based estimated p-value.
z.max: Z-score Maximization
z.max.ls: Z-score Maximization

Functions

ASSET Man page
N00 Man page
N01 Man page
N10 Man page
N11 Man page
checkSim1 Source code
checkSim2 Source code
coef.meta Source code
cor.meta Source code
cor.types Source code
corr.mat.logit Source code
data Man page
dlm.pval Source code
findMiss.vars Source code
getCI Source code
h.forest Source code
h.forestPlot Man page Source code
h.summary Man page Source code
h.traits Man page Source code
h.traits1 Source code
h.traits2 Source code
h.types Man page Source code
h.types0 Source code
meta.se Source code
myInv Source code
mySolve Source code
p.bon Source code
p.dlm Man page Source code
p.dlm.ls Man page
p.tube Man page Source code
qxd.prod.coef Source code
qxd.prod.cor Source code
qxd.prod.int Source code
score.compute Source code
traits.forest Source code
traits.forest0 Source code
traits.meta Source code
tube.pval Source code
tubeSim Source code
types.forest Source code
types.forest0 Source code
types.score Source code
types.wald Source code
z.max Man page Source code
z.max.ls Man page

Files

DESCRIPTION
LICENSE
NAMESPACE
NEWS
R
R/genes.R
R/pvals.R
R/traits.R
R/types.R
R/utils.R
data
data/Xdata.txt.bz2
data/ex_trait.rda
data/ex_types.rda
inst
inst/doc
inst/doc/vignette.R
inst/doc/vignette.Rnw
inst/doc/vignette.pdf
inst/sampleData
inst/sampleData/Xdata.txt
inst/sampleData/vdata.rda
man
man/ASSET.Rd
man/data.Rd
man/h.forestPlot.Rd
man/h.summary.Rd
man/h.traits.Rd
man/h.types.Rd
man/p.dlm.Rd
man/p.dlm.ls.Rd
man/p.tube.Rd
man/z.max.Rd
man/z.max.ls.Rd
ASSET documentation built on May 21, 2017, 1:38 a.m.