BGLR: Bayesian Generalized Linear Regression
Version 1.0.4

Bayesian Generalized Linear Regression.

Browse man pages Browse package API and functions Browse package files

AuthorGustavo de los Campos, Paulino Perez Rodriguez,
Date of publication2015-04-06 23:38:09
MaintainerPaulino Perez Rodriguez <perpdgo@colpos.mx>
LicenseGPL-3
Version1.0.4
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("BGLR", repos="http://R-Forge.R-project.org")

Man pages

BGLR: Bayesian Generalized Linear Regression
BLR: Bayesian Linear Regression
mice: mice dataset
mice.A: Pedigree info for the mice dataset
mice.pheno: Phenotypical data for the mice dataset
mice.X: Molecular markers
plot.BGLR: Plots for BGLR Analysis
predict.BGLR: Model Predictions
read_bed: read_bed
read_ped: read_ped
residuals.BGLR: Extracts models residuals
summary.BGLR: summary for BGLR fitted models
wheat: wheat dataset
wheat.A: Pedigree info for the wheat dataset
wheat.sets: Sets for cross validation (CV)
wheat.X: Molecular markers
wheat.Y: Grain yield
write_bed: write_bed

Functions

BGLR Man page Source code
BLR Man page Source code
dLambda Source code
dScaledInvChisq Source code
extract Source code
loglik_ordinal Source code
metropLambda Source code
mice Man page
mice.A Man page
mice.X Man page
mice.pheno Man page
onAttach Source code
plot.BGLR Man page Source code
predict.BGLR Man page Source code
read_bed Man page Source code
read_ped Man page Source code
residuals.BGLR Man page Source code
rinvGauss Source code
rtrun Source code
set.X Source code
setLT.BL Source code
setLT.BRR Source code
setLT.BRR_windows Source code
setLT.BayesA Source code
setLT.BayesBandC Source code
setLT.Fixed Source code
setLT.RKHS Source code
summary.BGLR Man page Source code
welcome Source code
wheat Man page
wheat.A Man page
wheat.X Man page
wheat.Y Man page
wheat.sets Man page
write_bed Man page Source code

Files

CHANGELOG
COPYING
DESCRIPTION
NAMESPACE
R
R/BGLR.R
R/methods.R
R/util_plink.R
build
build/vignette.rds
data
data/datalist
data/mice.RData
data/wheat.RData
demo
demo/00Index
demo/BA.R
demo/BB.R
demo/BL.R
demo/BRR.R
demo/BRR_windows.R
demo/BayesC.R
demo/Bernoulli.R
demo/RKHS.R
demo/RKHS_KA.R
demo/censored.R
demo/ordinal.R
demo/read_bed.R
demo/read_ped.R
demo/write_bed.R
inst
inst/doc
inst/doc/BGLR-extdoc.Rnw
inst/doc/BGLR-extdoc.pdf
inst/extdata
inst/extdata/sample.bed
inst/extdata/sample.bim
inst/extdata/sample.fam
inst/extdata/sample.map
inst/extdata/sample.ped
man
man/BGLR.Rd
man/BLR.Rd
man/figures
man/figures/ETA.png
man/mice.A.Rd
man/mice.Rd
man/mice.X.Rd
man/mice.pheno.Rd
man/plot.BGLR.Rd
man/predict.BGLR.Rd
man/read_bed.Rd
man/read_ped.Rd
man/residuals.BGLR.Rd
man/summary.BGLR.Rd
man/wheat.A.Rd
man/wheat.Rd
man/wheat.X.Rd
man/wheat.Y.Rd
man/wheat.sets.Rd
man/write_bed.Rd
src
src/Makevars
src/Makevars.win
src/util_plink.c
src/util_sample.c
vignettes
vignettes/BGLR-extdoc.Rnw
vignettes/fig_1.pdf
vignettes/fig_2.png
vignettes/fig_3.pdf
vignettes/fig_4.pdf
vignettes/fig_5.pdf
vignettes/fig_6.pdf
vignettes/references.bib
BGLR documentation built on May 21, 2017, 4:16 a.m.