FLAssess: Generic classes and methods for stock assessment models

A generic set of classes for stock assessment models are provided here. Individual assessment packages should extend the basic classes.

AuthorLaurie T. Kell <laurie.kell@iccat.int>
Date of publication2012-09-10 12:39:31
MaintainerFinlay Scott <finlay.scott@cefas.co.uk> ; Robert Scott <robert.scott@jrc.ec.europa.eu>
LicenseGPL 2.0
Version2.5.0

View on R-Forge

Functions

as.data.frame,FLAssess.retro,ANY,ANY-method Man page
as.data.frame,FLAssess.retro-method Man page
ass Man page
assess Man page
assess,FLAssess-method Man page
assess,FLSepVPA.control-method Man page
assess-methods Man page
FLAssess Man page
FLAssess-class Man page
FLAssess,FLQuant-method Man page
+,FLAssess,FLStock-method Man page
FLAssess-methods Man page
FLAssess,missing-method Man page
FLAssess.retro-class Man page
FLSepVPA.control Man page
FLSepVPA.control-class Man page
+,FLStock,FLAssess-method Man page
FLVPA-class Man page
harvest,FLAssess,missing-method Man page
index.hat Man page
index.hat<- Man page
index.hat<-,FLAssess,FLQuants-method Man page
index.hat,FLAssess-method Man page
index.name Man page
index.name<- Man page
index.name<-,FLAssess,character-method Man page
index.name,FLAssess-method Man page
index.range Man page
index.range<- Man page
index.range<-,FLAssess,list-method Man page
index.range,FLAssess-method Man page
index.res Man page
index.res<- Man page
index.res<-,FLAssess,FLQuants-method Man page
index.res,FLAssess-method Man page
merge,FLStock,FLAssess-method Man page
no.discards Man page
no.discards,FLStock-method Man page
no.discards-methods Man page
plot,FLAssess-methods Man page
plot,FLAssess,missing-method Man page
plot,FLAssess.retro,missing-method Man page
project Man page
projectControl Man page
projectControl-class Man page
projectControl,data.frame-method Man page
projectControl-methods Man page
projectControl,missing-method Man page
project,FLStock,missing,FLSR-method Man page
project,FLStock,projectControl,FLSR-method Man page
project-methods Man page
retro Man page
retro,FLStock,FLIndex,ANY,numeric-method Man page
retro,FLStock,FLIndices,ANY,numeric-method Man page
retro-methods Man page
SepVPA Man page
SepVPA,FLStock-method Man page
SepVPA-methods Man page
show,FLAssess-method Man page
stf Man page
stf,FLAssess-method Man page
stf,FLBiol-method Man page
stf,FLStock-method Man page
stf-methods Man page
summary,FLAssess-method Man page
units<-,FLAssess,list-method Man page
units,FLAssess-method Man page
update,FLAssess-method Man page
VPA Man page
VPA,FLStock-method Man page
VPA-methods Man page
window,FLAssess-method Man page
window,FLAssess.retro-method Man page
Z Man page
Z,FLStock-method Man page
Z-methods Man page

Files

FLAssess
FLAssess/data
FLAssess/data/nhke.RData
FLAssess/data/namhke.RData
FLAssess/data/alb.RData
FLAssess/data/rocklob.RData
FLAssess/R
FLAssess/R/VPA.R FLAssess/R/FLSP.R FLAssess/R/SepVPA.R FLAssess/R/projectControl.R FLAssess/R/deprecated.R FLAssess/R/handyfuncs.R FLAssess/R/methodsFLAssess.R FLAssess/R/zzz.R FLAssess/R/classFLAssess.R FLAssess/R/project.R FLAssess/R/accessors.R FLAssess/R/stf.R
FLAssess/NAMESPACE
FLAssess/tests
FLAssess/tests/VPA.R
FLAssess/tests/FLSP.R
FLAssess/tests/FLAssess.R
FLAssess/tests/sepVPA.R
FLAssess/tests/project.R
FLAssess/DESCRIPTION
FLAssess/man
FLAssess/man/SepVPA-methods.Rd FLAssess/man/retro.Rd FLAssess/man/FLAssess.retro-class.Rd FLAssess/man/FLSepVPA.control-class.Rd FLAssess/man/FLAssess-class.Rd FLAssess/man/no.discards-methods.Rd FLAssess/man/VPA-methods.Rd FLAssess/man/data.Rd FLAssess/man/projectControl.Rd FLAssess/man/project.Rd FLAssess/man/assess-methods.Rd FLAssess/man/stf-methods.Rd FLAssess/man/plotFLAssess-methods.Rd FLAssess/man/Z.Rd
FLAssess/src
FLAssess/src/Makevars
FLAssess/src/FLSP.cpp
FLAssess/src/Makevars.win
FLAssess/src/FLVPA.cpp
FLAssess/src/FLVPA.hpp
FLAssess/demo
FLAssess/demo/FLSP.R
FLAssess/demo/00Index

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.