HTSDiff: Differential Analysis of RNA-Seq Data with Poisson Mixture Models

A Poisson mixture model is implemented to identify differentially expressed genes from RNA-seq data.

AuthorAndrea Rau, Marie-Laure Martin-Magniette, Cathy Maugis-Rabusseau
Date of publication2015-01-18 22:05:02
MaintainerAndrea Rau <andrea.rau@jouy.inra.fr>
LicenseGPL (>=3)
Version1.0.6

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Files

DESCRIPTION
NAMESPACE
R
R/HTSDiff.R R/nullModelLogLike.R R/syntheticData.R R/zzz.R
build
build/vignette.rds
data
data/initialDataset.txt.gz
inst
inst/CITATION
inst/NEWS
inst/doc
inst/doc/HTSDiff.R
inst/doc/HTSDiff.Rnw
inst/doc/HTSDiff.pdf
man
man/HTSDiff-package.Rd man/HTSDiff.Rd man/initialDataset.Rd man/nullModelLogLike.Rd man/syntheticData.Rd
vignettes
vignettes/HTSDiff.Rnw
vignettes/HTSDiff.bib
vignettes/inconsolata.sty
vignettes/whbiocvignette.sty
vignettes/zi4.sty

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