HTSDiff: Differential Analysis of RNA-Seq Data with Poisson Mixture Models

A Poisson mixture model is implemented to identify differentially expressed genes from RNA-seq data.

AuthorAndrea Rau, Marie-Laure Martin-Magniette, Cathy Maugis-Rabusseau
Date of publication2015-01-18 22:05:02
MaintainerAndrea Rau <andrea.rau@jouy.inra.fr>
LicenseGPL (>=3)
Version1.0.6

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Files in this package

HTSDiff/DESCRIPTION
HTSDiff/NAMESPACE
HTSDiff/R
HTSDiff/R/HTSDiff.R HTSDiff/R/nullModelLogLike.R HTSDiff/R/syntheticData.R HTSDiff/R/zzz.R
HTSDiff/build
HTSDiff/build/vignette.rds
HTSDiff/data
HTSDiff/data/initialDataset.txt.gz
HTSDiff/inst
HTSDiff/inst/CITATION
HTSDiff/inst/NEWS
HTSDiff/inst/doc
HTSDiff/inst/doc/HTSDiff.R
HTSDiff/inst/doc/HTSDiff.Rnw
HTSDiff/inst/doc/HTSDiff.pdf
HTSDiff/man
HTSDiff/man/HTSDiff-package.Rd HTSDiff/man/HTSDiff.Rd HTSDiff/man/initialDataset.Rd HTSDiff/man/nullModelLogLike.Rd HTSDiff/man/syntheticData.Rd
HTSDiff/vignettes
HTSDiff/vignettes/HTSDiff.Rnw
HTSDiff/vignettes/HTSDiff.bib
HTSDiff/vignettes/inconsolata.sty
HTSDiff/vignettes/whbiocvignette.sty
HTSDiff/vignettes/zi4.sty

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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