cumul.sum | cumulative.sums |
get.counts | get counts |
h.to.g | Convert haplotype states to genotype states |
ibdhap.barplot | create ibd barplot |
ibdhap.compare.loci | ibdhap compare.loci |
ibdhap.compare.segs | ibdhap compare segments |
IBDhaploRtools-package | Functions for the Analysis of IBD Haplo output |
ibdhap.make.calls | ibdhap.make.calls |
ibdhap.make.true | ibdhap make true states |
ibdhap.names | Get chromosome names |
ibdhap.reduce.states | ibdhap reduce states |
ibdhap.seg.lengths | ibdhap.seg.lengths |
ibdhap.summary | ibdhap summary of called states |
ibdhap.transitions | create transition matrix |
ids_phased | Example MORGAN IBDhaplo output |
make.col.vec | make color vector |
meet.cutoff | meet cutoff |
removezeros | remove zeros |
return.ibd.val | return ibd value |
sumcol | sum over specific columns |
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