MELON-class: Class "MELON"

In MELON: Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments

Description

Class to represent normalized data from DNA methylation experiments according to the MELON algorithm.

Slots

normData:

"matrix" ~~

normFactors:

numeric vector ~~

idStabLoci:

numeric vector ~~

dataStabLoci:

"matrix" ~~

stabFeatures:

"matrix" ~~

refId:

numeric ~~

Methods

show

signature(object = "MELON"): ...

initialize

signature(object = "MELON"): ...

getNormData

signature(object = "MELON"): ...

getNormFactors

signature(object = "MELON"): ...

getIdStabLoci

signature(object = "MELON"): ...

getDataStabLoci

signature(object = "MELON"): ...

getRefId

signature(object = "MELON"): ...

getStabFeatures

signature(object = "MELON"): ...

normScatterPlot

signature(object = "MELON"): ...

Note

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Author(s)

Peter Pipelers <[e-mail]>

References

De Meyer Tim, Pipelers Peter, Szarc vel Szic Katarzyna, Denil Simon, Trooskens Geert, Renard Jean-Pierre, De Keulenaer Sarah, Vanden Berghe Wim and Van Criekinge Wim (2012) Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments.

See Also

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Examples

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MELON documentation built on May 2, 2019, 6:21 p.m.