getRefId: Returns the used reference sample in a normalized 'MELON'...

In MELON: Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments

Description

Method to return the used reference sample index in a normalized MELON object

Usage

getRefId(object)

Arguments

object

object of class MELON

Details

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Value

index of used reference sample. Either a user defined sample can be used as a reference sample, but the sample with the largest amount of unique intensities is by default used as reference sample.

Note

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Author(s)

Peter Pipelers <[e-mail]>

References

De Meyer Tim, Pipelers Peter, Szarc vel Szic Katarzyna, Denil Simon, Trooskens Geert, Renard Jean-Pierre, De Keulenaer Sarah, Vanden Berghe Wim and Van Criekinge Wim (2012) Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments.

See Also

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Examples

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MELON documentation built on May 2, 2019, 6:21 p.m.