MELON: Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments

Methylation Enriched LOci Normalization (MELON) for genome-wide DNA methylation experiments

Author
Tim De Meyer <Tim.DeMeyer@Ugent.be>
Date of publication
None
Maintainer
Peter Pipelers <Peter.Pipelers@UGent.be>
License
LGPL version 2 or newer
Version
0.1.1
URLs

View on R-Forge

Man pages

getDataStabLoci
Extracts data of stable loci from 'MELON' object
getIdStabLoci
Extracts the indices of the considered stable loci in the...
getNormData
Extracts normalized data from 'MELON' object
getNormFactors
Extracts normalization factors from 'MELON' object
getRefId
Returns the used reference sample in a normalized 'MELON'...
getStabFeatures
Extracts the stability results from 'MELON' object
makeMELON
Normalize data from DNA methylation experiments according to...
MELON-class
Class "MELON"
normScatterPlot
Create MELON scatter plots

Files in this package

MELON
MELON/R
MELON/R/AllClasses.R
MELON/R/MELON.R
MELON/R/makeMELON.R
MELON/R/AllGenerics.R
MELON/R/show-methods.R
MELON/R/methods-MELON.R
MELON/R/MELON-accessors.R
MELON/NAMESPACE
MELON/inst
MELON/inst/NEWS.Rd
MELON/DESCRIPTION
MELON/man
MELON/man/getStabFeatures.Rd
MELON/man/getRefId.Rd
MELON/man/makeMELON.Rd
MELON/man/getNormData.Rd
MELON/man/getNormFactors.Rd
MELON/man/getDataStabLoci.Rd
MELON/man/MELON-class.Rd
MELON/man/getIdStabLoci.Rd
MELON/man/normScatterPlot.Rd