Man pages for NSA
Post-normalization of total copy numbers

fitNSA.matrixFind normal regions
Non-documented_objectsNon-documented objects
NSAByTotalAndFracB.matrixFinds normal regions within tumoral samples (total,fracB)
NSANormalizationThe NSANormalization class
NSA-packagePackage NSA
process.NSANormalizationFinds normal regions within tumoral samples
process.SampleNormalizationFinds normal regions within tumoral samples
sampleNByTotalAndFracB.numericNormalize total copy numbers by samples (total,fracB)
SampleNormalizationThe SampleNormalization class
snpsNByTotalAndFracB.matrixNormalize allele-specific copy numbers (total,fracB)
SNPsNormalizationThe SNPsNormalization class
NSA documentation built on May 2, 2019, 4:58 p.m.