This is a set of 20,000 phylogenetic trees in multiphylo (ape) format.
Node age estimates were sampled from 6 independent MCMC analyses using DPPDiv (Heath et al. 2012; http://cteg.berkeley.edu/software.html#dppdiv) on a fixed topology, using the data and tree from Yang and Yoder (2003).
Heath, T. A., M. T. Holder and J. P. Huelsenbeck. 2012. A Dirichlet process prior for estimating lineage-specific substitution rates. Mol. Biol. Evol. 29: 939-955.
Yang, Z. and A. D. Yoder. 2003. Comparison of likelihood and Bayesian methods for estimating divergence times using multiple gene loci and calibration points, with application to a radiation of cute-looking mouse lemur species. Syst. Biol. 52: 705-716.
1 2 3 4 5 6 7 8
#not run #data(HeathEtAl2012) #library(ape) #treeOne<-HeathEtAl2012$trees[] #plot the tree #plot(treeOne,show.node.label=TRUE)
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.