PyronWiens2011: Pyron and Wiens 2011 tree of amphibians

Description Usage Details Source Examples

Description

This has a congruified timetree (PyronWiens2011) from this paper. Time-scaling used PhyloOrchard[AlfaroEtAl2009] as the donor tree and treePL to smooth rates. The tree is in phylo (ape) format.

Usage

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Details

Make sure to cite the paper below when you use this dataset.

Source

Pyron, R. A. and J. J. Wiens. 2011. A large-scale phylogeny of Amphibia including over 2800 species, and a revised classification of extant frogs, salamanders, and caecilians. Molecular Phylogenetics and Evolution 61: 543-583.

Examples

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#not run
#data(PyronWiens2011)
#amphibianTree<-PyronWiens2011
#plot the tree
#plot(amphibianTree,show.node.label=TRUE)

PhyloOrchard documentation built on May 2, 2019, 5:22 p.m.