Pairs: Make pairwise graphs for qPCR data from qPCR eset

In QCqPCR: Functions for quality control of RT-qPCR data

Description

Takes set of qPCR data and makes pairwise graphs between all the samples.

Usage

qPCRPairs(qPCRBatch, ...)

## S4 method for signature 'qPCRBatch'
qPCRPairs(qPCRBatch,  plotType = "Sample", writeToFile = FALSE, pairsToPlot = "All") 

Arguments

qPCRBatch	Expression set containing qPCR data.
...	Extra arguments, detailed below
plotType	type of plot. So far, "Sample" and "Plate" are implemented. Default is "Sample".
writeToFile	logical, write to jpeg-file. Default is FALSE.
pairsToPlot	which pairs shall be plotted. Default is "All".

Details

generate pairwise graphs, optionally saving them to file.

Value

produces graph and optionally writes to jpeg if called.

Methods

qPCRPairs

(qPCRBatch): method for object of class "qPCRBatch".

Author(s)

James Perkins [e-mail]

QCqPCR documentation built on May 2, 2019, 6:30 p.m.