PseudoPlot: Plot Ct Values when normalised against different housekeeping...

In QCqPCR: Functions for quality control of RT-qPCR data

Description

Takes normalised qPCR data and plot the different Ct values from the different house keeping genes

Usage

PseudoPlot(qPCRBatch, ...)

## S4 method for signature 'qPCRBatch'
PseudoPlot(qPCRBatch, plotType = "Cts.Values", writeToFile = FALSE, 
           cutOff = NA, statType = "parametric", plateToPlot = "AllPlates") 

Arguments

qPCRBatch	data set containing data on different Ct values normed to the different HKGs
...	Extra arguments, detailed below
plotType	yet to fill
writeToFile	yet to fill
cutOff	yet to fill
statType	yet to fill
plateToPlot	yet to fill

Details

Takes normalised qPCR data and plot the different Ct values from the different house keeping genes. Plots HKGs against each other on the same graph, ordered by a single HKG

Value

produces graph and optionally writes to png if called.

Methods

PseudoPlot

(qPCRBatch): method for object of class "qPCRBatch"

Author(s)

James Perkins [e-mail]

QCqPCR documentation built on May 2, 2019, 6:30 p.m.