REIDS: Random Effects for the Identification of Differential Splicing

Random Effects for the Identification of Differential Splicing.

Author
Marijke Van Moerbeke and Geert-Jan Bex
Date of publication
2016-10-19 07:03:02
Maintainer
Marijke Van Moerbeke <marijkevanmoerbeke@uhasselt.be>
License
GPL-3
Version
0.0.1

View on R-Forge

Man pages

ASExons
"ASExons"
CreateOutput
"CreateOutput"
DataProcessing
DataProcessing
ExonTesting
"ExonTesting"
FilterInformativeGenes
"FilterInformativeGenes"
FIRMAScores
"FIRMAScores"
iniREIDS
"iniREIDS"
PivotTransformData
"PivotTransformation"
PlotFunction
"PlotFunction"
REIDS
Random Effects for the Identification of Differential...
REIDSFunction
"REIDSFunction"
REIDSFunction_ClusterVersion
"REIDS_ClusterVersion"
REIDSmodel_intern
"REIDSmodel_intern"
Search
"Search"
SpliceIndex
"SpliceIndex"

Files in this package

REIDS/DESCRIPTION
REIDS/NAMESPACE
REIDS/R
REIDS/R/Functions.R
REIDS/R/REIDS.R
REIDS/build
REIDS/build/vignette.rds
REIDS/inst
REIDS/inst/doc
REIDS/inst/doc/ASExons.R
REIDS/inst/doc/ASExons.pbs
REIDS/inst/doc/CreateOutput.R
REIDS/inst/doc/CreateOutput.pbs
REIDS/inst/doc/DataProcessing.R
REIDS/inst/doc/DataProcessing.pbs
REIDS/inst/doc/ExonTesting.R
REIDS/inst/doc/ExonTesting.pbs
REIDS/inst/doc/FIRMAScores.R
REIDS/inst/doc/FIRMAScores.pbs
REIDS/inst/doc/Line_Indexer.pbs
REIDS/inst/doc/Line_Indexer.py
REIDS/inst/doc/REIDSFunction_ClusterVersion.R
REIDS/inst/doc/REIDSFunction_ClusterVersion.pbs
REIDS/inst/doc/REIDS_Vignette.R
REIDS/inst/doc/REIDS_Vignette.Rnw
REIDS/inst/doc/REIDS_Vignette.pdf
REIDS/inst/doc/SpliceIndex.R
REIDS/inst/doc/SpliceIndex.pbs
REIDS/inst/doc/geneID_minus5.csv
REIDS/man
REIDS/man/ASExons.Rd
REIDS/man/CreateOutput.Rd
REIDS/man/DataProcessing.Rd
REIDS/man/ExonTesting.Rd
REIDS/man/FIRMAScores.Rd
REIDS/man/FilterInformativeGenes.Rd
REIDS/man/PivotTransformData.Rd
REIDS/man/PlotFunction.Rd
REIDS/man/REIDS.Rd
REIDS/man/REIDSFunction.Rd
REIDS/man/REIDSFunction_ClusterVersion.Rd
REIDS/man/REIDSmodel_intern.Rd
REIDS/man/Search.Rd
REIDS/man/SpliceIndex.Rd
REIDS/man/iniREIDS.Rd
REIDS/vignettes
REIDS/vignettes/BVSPermbib.bib
REIDS/vignettes/DataProcessing_Folders.png
REIDS/vignettes/REIDS_Vignette.Rnw
REIDS/vignettes/TissueData_DEGene_ASExon.pdf
REIDS/vignettes/TissueData_DEGene_ASExon_ArrayScores.pdf
REIDS/vignettes/TissueData_DEGene_ASExon_ArrayScoresDensity.pdf
REIDS/vignettes/TissueData_DEGene_ASExon_FIRMAScores.pdf
REIDS/vignettes/asa.bst