REIDS: Random Effects for the Identification of Differential Splicing
Version 0.0.1

Random Effects for the Identification of Differential Splicing.

AuthorMarijke Van Moerbeke and Geert-Jan Bex
Date of publication2016-10-19 07:03:02
MaintainerMarijke Van Moerbeke <marijkevanmoerbeke@uhasselt.be>
LicenseGPL-3
Version0.0.1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("REIDS", repos="http://R-Forge.R-project.org")

Popular man pages

ASExons: "ASExons"
CreateOutput: "CreateOutput"
FilterInformativeGenes: "FilterInformativeGenes"
iniREIDS: "iniREIDS"
REIDS: Random Effects for the Identification of Differential...
REIDSFunction_ClusterVersion: "REIDS_ClusterVersion"
Search: "Search"
See all...

All man pages Function index File listing

Man pages

ASExons: "ASExons"
CreateOutput: "CreateOutput"
DataProcessing: DataProcessing
ExonTesting: "ExonTesting"
FilterInformativeGenes: "FilterInformativeGenes"
FIRMAScores: "FIRMAScores"
iniREIDS: "iniREIDS"
PivotTransformData: "PivotTransformation"
PlotFunction: "PlotFunction"
REIDS: Random Effects for the Identification of Differential...
REIDSFunction: "REIDSFunction"
REIDSFunction_ClusterVersion: "REIDS_ClusterVersion"
REIDSmodel_intern: "REIDSmodel_intern"
Search: "Search"
SpliceIndex: "SpliceIndex"

Functions

ASExons Man page Source code
CreateOutput Man page Source code
DataProcessing Man page Source code
ExonTesting Man page Source code
FIRMAScores Man page Source code
FilterInformativeGenes Man page Source code
PivotTransformData Man page Source code
PlotFunction Man page Source code
REIDS Man page
REIDS-package Man page
REIDSFunction Man page Source code
REIDSFunction_ClusterVersion Man page Source code
REIDSmodel_intern Man page Source code
Search Man page Source code
SpliceIndex Man page Source code
iniREIDS Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/Functions.R
R/REIDS.R
build
build/vignette.rds
inst
inst/doc
inst/doc/ASExons.R
inst/doc/ASExons.pbs
inst/doc/CreateOutput.R
inst/doc/CreateOutput.pbs
inst/doc/DataProcessing.R
inst/doc/DataProcessing.pbs
inst/doc/ExonTesting.R
inst/doc/ExonTesting.pbs
inst/doc/FIRMAScores.R
inst/doc/FIRMAScores.pbs
inst/doc/Line_Indexer.pbs
inst/doc/Line_Indexer.py
inst/doc/REIDSFunction_ClusterVersion.R
inst/doc/REIDSFunction_ClusterVersion.pbs
inst/doc/REIDS_Vignette.R
inst/doc/REIDS_Vignette.Rnw
inst/doc/REIDS_Vignette.pdf
inst/doc/SpliceIndex.R
inst/doc/SpliceIndex.pbs
inst/doc/geneID_minus5.csv
man
man/ASExons.Rd
man/CreateOutput.Rd
man/DataProcessing.Rd
man/ExonTesting.Rd
man/FIRMAScores.Rd
man/FilterInformativeGenes.Rd
man/PivotTransformData.Rd
man/PlotFunction.Rd
man/REIDS.Rd
man/REIDSFunction.Rd
man/REIDSFunction_ClusterVersion.Rd
man/REIDSmodel_intern.Rd
man/Search.Rd
man/SpliceIndex.Rd
man/iniREIDS.Rd
vignettes
vignettes/BVSPermbib.bib
vignettes/DataProcessing_Folders.png
vignettes/REIDS_Vignette.Rnw
vignettes/TissueData_DEGene_ASExon.pdf
vignettes/TissueData_DEGene_ASExon_ArrayScores.pdf
vignettes/TissueData_DEGene_ASExon_ArrayScoresDensity.pdf
vignettes/TissueData_DEGene_ASExon_FIRMAScores.pdf
vignettes/asa.bst
REIDS documentation built on May 21, 2017, 12:28 a.m.