RFLPtools: Tools to analyse RFLP data

RFLPtools provides functions to analyse DNA fragment samples (i.e. derived from RFLP-analysis) and standalone BLAST report files (i.e. DNA sequence analysis).

AuthorFabienne Flessa, Alexandra Kehl, Mohammed Aslam Imtiaz, Matthias Kohl
Date of publication2014-08-13 20:17:37
MaintainerMatthias Kohl <Matthias.Kohl@stamats.de>
LicenseLGPL-3
Version1.6

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Files in this package

RFLPtools/DESCRIPTION
RFLPtools/NAMESPACE
RFLPtools/NEWS
RFLPtools/R
RFLPtools/R/FragMatch.R RFLPtools/R/RFLPcombine.R RFLPtools/R/RFLPdist.R RFLPtools/R/RFLPdist2.R RFLPtools/R/RFLPdist2ref.R RFLPtools/R/RFLPlod.R RFLPtools/R/RFLPplot.R RFLPtools/R/RFLPqc.R RFLPtools/R/RFLPrefplot.R RFLPtools/R/diffDist.R RFLPtools/R/germ.R RFLPtools/R/linCombDist.R RFLPtools/R/read.blast.R RFLPtools/R/read.rflp.R RFLPtools/R/sim2dist.R RFLPtools/R/simMatrix.R RFLPtools/R/simulateRFLPData.R RFLPtools/R/write.hclust.R
RFLPtools/build
RFLPtools/build/vignette.rds
RFLPtools/data
RFLPtools/data/BLASTdata.RData
RFLPtools/data/RFLPdata.RData
RFLPtools/data/RFLPref.RData
RFLPtools/data/newDataGerm.RData
RFLPtools/data/refDataGerm.RData
RFLPtools/inst
RFLPtools/inst/CITATION
RFLPtools/inst/doc
RFLPtools/inst/doc/RFLPtools.R
RFLPtools/inst/doc/RFLPtools.Rnw
RFLPtools/inst/doc/RFLPtools.pdf
RFLPtools/inst/extdata
RFLPtools/inst/extdata/AZ091016_report.txt
RFLPtools/inst/extdata/BLASTexample.txt
RFLPtools/inst/extdata/RFLPexample.txt
RFLPtools/inst/scripts
RFLPtools/inst/scripts/SimulationStudy.R
RFLPtools/man
RFLPtools/man/0RFLP-package.Rd RFLPtools/man/BLASTdata.Rd RFLPtools/man/FragMatch.Rd RFLPtools/man/RFLPcombine.Rd RFLPtools/man/RFLPdata.Rd RFLPtools/man/RFLPdist.Rd RFLPtools/man/RFLPdist2.Rd RFLPtools/man/RFLPdist2ref.Rd RFLPtools/man/RFLPlod.Rd RFLPtools/man/RFLPplot.Rd RFLPtools/man/RFLPqc.Rd RFLPtools/man/RFLPref.Rd RFLPtools/man/RFLPrefplot.Rd RFLPtools/man/diffDist.Rd RFLPtools/man/germ.Rd RFLPtools/man/linCombDist.Rd RFLPtools/man/newDataGerm.Rd RFLPtools/man/nrBands.Rd RFLPtools/man/read.blast.Rd RFLPtools/man/read.rflp.Rd RFLPtools/man/refDataGerm.Rd RFLPtools/man/sim2dist.Rd RFLPtools/man/simMatrix.Rd RFLPtools/man/simulateRFLPdata.Rd RFLPtools/man/write.hclust.Rd
RFLPtools/vignettes
RFLPtools/vignettes/HFU.jpg
RFLPtools/vignettes/RFLPtools.Rnw
RFLPtools/vignettes/logoTueb.png
RFLPtools/vignettes/logoUBT.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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