refDataGerm: Example data set from GERM software

In RFLPtools: Tools to analyse RFLP data

Description

This is the reference data taken from the GERM software.

Usage

data(refDataGerm)

Format

A data frame with 250 observations on the following six variables

Sample

character: sample identifier.

Enzyme

character: enzyme used.

Band

integer: band number.

MW

integer: molecular weight.

Genus

character: genus of sample.

Species

character: species of sample.

Details

See GERM software.

Source

The data set was taken from the GERM software (table 'Example Data').

References

Ian A. Dickie, Peter G. Avis, David J. McLaughlin, Peter B. Reich. Good-Enough RFLP Matcher (GERM) program. Mycorrhiza 2003, 13:171-172.

Examples

data(refDataGerm)
str(refDataGerm)

Example output

Loading required package: RColorBrewer
'data.frame':	250 obs. of  6 variables:
 $ Sample : chr  "djm1094" "djm1094" "djm1094" "djm1094" ...
 $ Enzyme : chr  "Dpn II" "Dpn II" "Dpn II" "Hinf I" ...
 $ Band   : int  1 2 3 1 2 3 1 2 1 2 ...
 $ MW     : num  352 112 100 339 230 ...
 $ Genus  : chr  "Hydnellum" "Hydnellum" "Hydnellum" "Hydnellum" ...
 $ Species: chr  "cf.aurantiacum" "cf.aurantiacum" "cf.aurantiacum" "cf.aurantiacum" ...

RFLPtools documentation built on May 2, 2019, 6:08 p.m.