Man pages for RFLPtools
Tools to analyse RFLP data
| 0RFLP-package | Tools to analyse RFLP-data |
| BLASTdata | Example data set for BLAST data |
| diffDist | Distance Matrix Computation |
| FragMatch | Compute matches for RFLP data via FragMatch. |
| germ | Compute matches for RFLP data via GERM. |
| linCombDist | Linear Combination of Distances |
| newDataGerm | Example data set from GERM software |
| nrBands | Function to compute number of bands. |
| read.blast | Read BLAST data |
| read.rflp | Read RFLP data |
| refDataGerm | Example data set from GERM software |
| RFLPcombine | Combine RFLP data sets |
| RFLPdata | Example data set for RFLP data |
| RFLPdist | Compute distances for RFLP data. |
| RFLPdist2 | Compute distances for RFLP data. |
| RFLPdist2ref | Compute distance between RFLP data and RFLP reference data. |
| RFLPlod | Remove bands below LOD |
| RFLPplot | Function to plot RFLP data. |
| RFLPqc | Quality control for RFLP data |
| RFLPref | Example data set for RFLP reference |
| RFLPrefplot | Function for a visual comparison of RFLP samples with... |
| sim2dist | Convert similarity matrix to dist object. |
| simMatrix | Similarity matrix for BLAST data. |
| simulateRFLPdata | Simulate RFLP data. |
| write.hclust | Cut a hierarchical cluster tree and write cluster identifiers... |
